News Workshop at University of Helsinki on April 30th 2026.
OpenMS
Projects
OpenMS-lib pyOpenMS pyOpenMS Viz OpenMS Web Apps
Apps
Featured Apps Affiliated Apps Archived Apps
Learn
Liquid Chromatography⁠ Mass Spectrometry⁠ Identification and Quantification⁠ Background⁠ Glossary⁠ Dave Tabb’s Tutorials⁠
Community
Calendar News Getting Involved OpenMS Fellowship Annual Developer Retreat Code of Conduct
Services
Scientific and Technical Support
About
Governance Our Sponsors Our Sponsorship Program Research Partnerships Publications Leadership Contact
Sponsor Us Sponsor Us Partner with OpenMS Partner
Sponsor Us Sponsor Us Partner with OpenMS Partner
OpenMS
Projects
OpenMS-lib pyOpenMS pyOpenMS Viz OpenMS Web Apps
Apps
Featured Apps Affiliated Apps Archived Apps
Learn
Liquid Chromatography⁠ Mass Spectrometry⁠ Identification and Quantification⁠ Background⁠ Glossary⁠ Dave Tabb’s Tutorials⁠
Community
Calendar News Getting Involved OpenMS Fellowship Annual Developer Retreat Code of Conduct
Services
Scientific and Technical Support
About
Governance Our Sponsors Our Sponsorship Program Research Partnerships Publications Leadership Contact
Sponsor Us Sponsor Us Partner with OpenMS Partner
Sponsor Us Sponsor Us Partner with OpenMS Partner

Community tools

Featured Apps

GUI or Command Line Apps actively maintained by the OpenMS core development team.

  • FLASH App

    Web-based analysis and visualization of top-down proteomics data

    Maintainers Tom Muller, Kyowon Jeong

    • Demo
    • Install (Windows)
    • GitHub
  • OpenDIAKiosk

    Interactive DIA proteomics data analysis

    Maintainers Justin Sing

    • Demo
    • Install (Windows)
    • GitHub
  • umetaflow

    Web-based access to the umetaflow pipeline

    • Demo
    • GitHub
  • OpenDDA

    Web-based workflow for DDA proteomics

    Maintainers Tom Müller

    • Demo
    • Install (Windows)
    • GitHub
  • naseweis

    Web-based access to the nucleic acid search engine (NASE)

    Maintainers Sam Wein

    • Demo
    • GitHub
  • NuXL

    Web-based analysis pipeline for XL-MS data

    Maintainers Arslan Siraj

    • Demo
    • Install (Windows)
    • GitHub
  • MHCquant

    Web-based analysis pipeline for immunopeptidomics

    Maintainers Jonas Scheid

    • Demo

Don't see your functionality tool? Contact us.

OpenMS

The open-source framework for mass spectrometry.

SUPPORT

  • Donate
  • Sponsor Us

COMMUNITY

  • Calendar
  • News
  • Getting Involved
  • OpenMS Fellowship
  • Annual Developer Retreat
  • Code of Conduct
  • Executive Committee Charter
  • Code of Conduct Enforcement Procedures

ABOUT

  • Governance
  • Our Sponsors
  • Our Sponsorship Program
  • Research Partnerships
  • Publications
  • Leadership
  • Contact

LEGAL

  • Privacy
  • Press kit
  • Impressum

© 2026 OpenMS Inc. All rights reserved.